Detailed information of matrix profile MA1888.2

  1. Home
  2. Matrix > MA1888.2

Profile summary
Name: Irf-b
Matrix ID: MA1888.2
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 32750546
Uniprot ID:  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 124 858 419 940 126 97 299 199 883 15 19 259 10 29 107 ]
C [ 22 47 10 14 676 176 226 207 10 71 3 56 19 917 33 ]
G [ 842 70 259 31 168 79 263 388 85 880 4 14 36 14 829 ]
T [ 12 25 312 15 30 648 213 207 21 33 974 672 935 40 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1888.1 MA1888 1 Irf-b Ciona intestinalis
Interferon-regulatory factors Tryptophan cluster factors
MA1888.2 MA1888 2 Irf-b Ciona intestinalis
Interferon-regulatory factors Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: