| Name: | Klf5-like |
| Matrix ID: | MA1892.1 |
| Class: | C2H2 zinc finger factors |
| Family: | Three-zinc finger Kruppel-related |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: |
| A [ | 160 | 158 | 161 | 184 | 210 | 248 | 273 | 74 | 10 | 10 | 53 | 17 | 33 | 166 | 164 | 161 | 204 | 193 | 171 | 144 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 217 | 199 | 217 | 212 | 210 | 195 | 119 | 11 | 18 | 10 | 698 | 11 | 62 | 82 | 122 | 317 | 260 | 213 | 206 | 219 | ] |
| G [ | 404 | 436 | 409 | 395 | 329 | 288 | 298 | 898 | 949 | 968 | 44 | 956 | 131 | 589 | 508 | 275 | 305 | 391 | 426 | 463 | ] |
| T [ | 219 | 207 | 214 | 209 | 251 | 269 | 311 | 18 | 23 | 12 | 205 | 17 | 774 | 164 | 206 | 247 | 231 | 203 | 197 | 174 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1892.1 | MA1892 | 1 | Klf5-like |
Ciona intestinalis
|
Three-zinc finger Kruppel-related | C2H2 zinc finger factors |  |
| MA1892.2 | MA1892 | 2 | Klf5-like |
Ciona intestinalis
|
Three-zinc finger Kruppel-related | C2H2 zinc finger factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: